BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D06LP1|AL429385
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig452 1076 0.0
>3x_Contig452
Length = 1623
Score = 1076 bits (541), Expect = 0.0
Identities = 545/547 (99%)
Strand = Plus / Plus
Query: 2 cagtgggcgcaagaaggggtctaagaaccttggaatcagtaatggggctgttaatgctac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 cagtgggcgcaagaaggggtctaagaaccttggaatcagtaatggggctgttaatgctac 1047
Query: 62 tggtagtgggacgcgccgctcacgtagctcgtcacagcactacgggatggaccactcatc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 tggtagtgggacgcgccgctcacgtagctcgtcacagcactacgggatggaccactcatc 1107
Query: 122 gtcgtctgcctcttccccaactatagctatggctacttctttgctgcttcaacagcagca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 gtcgtctgcctcttccccaactatagctatggctacttctttgctgcttcaacagcagca 1167
Query: 182 acagtttcataacgggcaggctcactatgctgctccgcaccgtataatgaaacggggcac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 acagtttcataacgggcaggctcactatgctgctccgcaccgtataatgaaacggggcac 1227
Query: 242 agcggatagcgcaaattcgagttctaattcaagctcgaattcagatccagtatcgaaacg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 agcggatagcgcaaattcgagttctaattcaagctcgaattcagatccagtatcgaaacg 1287
Query: 302 agatagagaacttatcgacgccttgaacaagctctcacgttgcaaatcacctccacagtc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 agatagagaacttatcgacgccttgaacaagctctcacgttgcaaatcacctccacagtc 1347
Query: 362 gcctgatccaatgcagacggctaaattacccatgctctcgtcgttctggggttcggtgga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 gcctgatccaatgcagacggctaaattacccatgctctcgtcgttctggggttcggtgga 1407
Query: 422 tgtcccactgcgacaagaacatgagccacagcttcagcatcaactccaactccagctgca 481
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1408 tgtcccactgcgacaagaacatgagcaacagcttcagcatcaactccaactccagctgca 1467
Query: 482 gctccaacaccaactgcaattgcaacaccagcaccaacagatacattcacaacaaaactc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 gctccaacaccaactgcaattgcaacaccagcaccaacagatacattcacaacaaaactc 1527
Query: 542 acttwat 548
|||| ||
Sbjct: 1528 acttaat 1534
Score = 127 bits (64), Expect = 3e-29
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 571 ttccaggtgtcatgtggcccaatacgccgccgcctcaagtcgctagttcttcttcatcat 630
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1557 ttccaggtgtcatgtggcccaatacgccgccgnctcaagtcgctagttcttcttcatcat 1616
Query: 631 tgcacca 637
|||||||
Sbjct: 1617 tgcacca 1623
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5928
Number of Sequences: 1807
Number of extensions: 5928
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)